DNA Binding Motif

						

			
Accessions: TEAD4_CLOCK_2_3_4 (HumanTF2 1.0)

			
Names: TEAD4_CLOCK
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 20
Consensus: GGwATGykrskkrCACGTGb
Weblogo: 
PSSM: P0      A      C      G      T
01    553     43   2842    152      G
02    164    142   2842    207      G
03   1395    198     12   1447      w
04   2842      1     18      0      A
05     10    121      2   2842      T
06     44    200   2842    369      G
07     33   1469     95   1245      y
08    630    545    789    878      k
09    786    349   1175    532      r
10    563    811   1008    460      s
11    503    329    977   1033      k
12    635    596    885    725      k
13   1180    457   1116     89      r
14    265   2842     15      0      C
15   2842     15    103     63      A
16      3   2842      5    254      C
17    165     10   2842      4      G
18      3    180     10   2842      T
19      0      7   2842    169      G
20     53    806    811   1172      b
Type: Heterodimer
Binding TFs: CLOCK_TF1 / CLOCK_TF2 (Helix-loop-helix DNA-binding domain)
TEAD4_TF1 (TEA/ATTS domain family)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.