DNA Binding Motif
Accessions: | HOXB2_ELF1_2 (HumanTF2 1.0) |
Names: | HOXB2_ELF1 |
Organisms: | Homo sapiens |
Libraries: | HumanTF2 1.0 1 1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed] |
Notes: | Site type: heterodimeric; Experiment type: CAP-SELEX |
Length: | 22 |
Consensus: | ggymATtArsrwksmGGAAGtr |
Weblogo: | |
PSSM: | P0 A C G T 01 692 804 1218 770 g 02 577 768 1618 522 g 03 727 1541 774 1943 y 04 1756 1728 713 272 m 05 3484 255 892 132 A 06 0 0 0 3484 T 07 343 1229 76 3484 t 08 3484 75 146 349 A 09 942 723 1363 455 r 10 501 970 1336 677 s 11 1339 471 934 740 r 12 1425 315 821 923 w 13 824 810 902 948 k 14 810 1235 1260 180 s 15 1106 2203 160 15 m 16 18 0 3484 18 G 17 22 0 3484 17 G 18 3484 44 15 23 A 19 3484 27 0 260 A 20 540 428 3484 36 G 21 437 769 547 1731 t 22 1017 483 1456 529 r |
Type: | Heterodimer |
Binding TFs: | ELF1_TF2 (Ets-domain, Transcription factor protein N terminal) HOXB2_TF1 (Homeobox domain) |
Publications: | Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed] |
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