DNA Binding Motif

						

			
Accessions: ELK1_TEF (HumanTF2 1.0), UN0504.1 (JASPAR 2024)

			
Names: ELK1_TEF, ELK1::TEF
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1, JASPAR 2024 2
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX, HT-SELEX
Length: 17
Consensus: rcCGGAaGTKACGTAAb
Weblogo: 
PSSM: P0      A      C      G      T
01    746    165    581    207      r
02    275   1240    460     74      c
03     95   1700     41     30      C
04      7     15   1700     14      G
05      9     35   1700     13      G
06   1700     58     50     75      A
07   1271    243     39    429      a
08    375    117   1200      8      G
09      0      1      0   1700      T
10     15     10    653   1700      K
11   1700     11    498     11      A
12      0   1700     21    373      C
13    554      7   1700      5      G
14     15    304     32   1700      T
15   1700    215     23     28      A
16   1700      2     20      4      A
17     74    723    447    455      b
Type: Heterodimer
Binding TFs: Q10587 (bZIP transcription factor, Basic region leucine zipper)
ELK1_TF2 (Ets-domain)
ELK1_Full (Ets-domain)
TEF_TF1 / TEF_TF2 (bZIP transcription factor, Basic region leucine zipper)
ELK1_TF1 (Ets-domain)
Q10587
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.