DNA Binding Motif

						

			
Accessions: GCM2_FOXI1_2 (HumanTF2 1.0)

			
Names: GCM2_FOXI1
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 13
Consensus: TrTTkATrcGGGy
Weblogo: 
PSSM: P0      A      C      G      T
01    475    403    400   3244      T
02   1433    210   3244    337      r
03    472    141    367   3244      T
04    635    317    526   3244      T
05    129     46   1867   1377      k
06   3244    441    547    233      A
07     18    308     18   3244      T
08    975    277   2269     13      r
09    428   3244   1210    757      c
10    468     22   3244    213      G
11      0     38   3244     12      G
12     57      0   3244     27      G
13    546   1109    267   1323      y
Type: Heterodimer
Binding TFs: FOXI1_TF2 (Fork head domain)
GCM2_TF1 (GCM motif protein)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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