DNA Binding Motif

						

			
Accessions: GCM2_FOXI1_1 (HumanTF2 1.0)

			
Names: GCM2_FOXI1
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 13
Consensus: rTAAATAmGGGya
Weblogo: 
PSSM: P0      A      C      G      T
01  16133   3665  26135   1247      r
02   7712   2941   2554  42268      T
03  42268   9422    855    865      A
04  42268   1183   1314    828      A
05  42268    222    401     71      A
06      0    663     45  42268      T
07  42268    387   2915      3      A
08  15666  12828   6937   6836      m
09   3747   1058  42268   3046      G
10      0     80  42268    170      G
11     22    237  42268    275      G
12   7494  14818   3083  16872      y
13  13024   8816  10317  10110      a
Type: Heterodimer
Binding TFs: FOXI1_TF2 (Fork head domain)
GCM2_TF1 (GCM motif protein)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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