DNA Binding Motif

						

			
Accessions: HOXB2_ELF1_2_3_4 (HumanTF2 1.0)

			
Names: HOXB2_ELF1
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 17
Consensus: TaATkrwyvMGGAAGtr
Weblogo: 
PSSM: P0      A      C      G      T
01    169     40     31   1262      T
02   1262    107    390    302      a
03   1262     65    236     32      A
04     33    329    232   1262      T
05     72    167    837    426      k
06    833     99    429    167      r
07    338    309    218    397      w
08    286    332    251    394      y
09    361    349    486     66      v
10    330    873     53      6      M
11      0      9   1262      4      G
12      0      0   1262      1      G
13   1262     24      0     22      A
14   1262     31      1    146      A
15    141     96   1262      2      G
16    311    548    340   1262      t
17    375    260    475    152      r
Type: Heterodimer
Binding TFs: ELF1_TF2 (Ets-domain, Transcription factor protein N terminal)
HOXB2_TF1 (Homeobox domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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