DNA Binding Motif

						

			
Accessions: MA0489.1 (JASPAR 2024)

			
Names: JUN, JUN(var.2)
Organisms: Homo sapiens, Rattus norvegicus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 14
Consensus: rrrrrrTGAsTCAt
Weblogo: 
PSSM: P0      A      C      G      T
01   4852   1250   2818   2036      r
02   3927   1324   4110   1595      r
03   3726   1127   4330   1773      r
04   4396   1122   3461   1977      r
05   4146    593   4213   2004      r
06   5930    993   4033      0      r
07      0      0      0  10956      T
08      0      0  10956      0      G
09  10953      0      0      3      A
10    382   5704   4090    780      s
11    199      0      0  10757      T
12    956  10000      0      0      C
13  10956      0      0      0      A
14    376   2509   2645   5426      t
Type: Heterodimer
Binding TFs: P05412 (bZIP transcription factor, Jun-like transcription factor, Basic region leucine zipper)
P05412
Binding Sites: MA0489.1.1
MA0489.1.10 / MA0489.1.13 / MA0489.1.17 / MA0489.1.18
MA0489.1.11
MA0489.1.12
MA0489.1.14
MA0489.1.15
MA0489.1.16
MA0489.1.19
MA0489.1.2
MA0489.1.20
MA0489.1.3
MA0489.1.4
MA0489.1.5
MA0489.1.6
MA0489.1.7
MA0489.1.8
MA0489.1.9
			
Publications: Li M, Ge Q, Wang W, Wang J, Lu Z. c-Jun binding site identification in K562 cells. Journal of genetics and genomics = Yi chuan xue bao 38:235-42 (2011). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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