footprintDB - a database of transcription factors with annotated cis elements (DNA motifs and sites) and binding interfaces

Transcription Factor

Accessions:	P05412 (JASPAR 2024)
Names:	Activator protein 1, AP1, JUN_HUMAN, p39, Proto-oncogene c-Jun, Transcription factor AP-1, Transcription factor AP-1 subunit Jun, Transcription factor Jun, V-jun avian sarcoma virus 17 oncogene homolog
Organisms:	Homo sapiens, Rattus norvegicus
Libraries:	JASPAR 2024 ¹ ¹ Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot:	P05412
Length:
Binding Motifs:	MA0099.2 TGAmTCA MA0462.1 rrwATGAsTCA MA0488.1 awrATGAtGTmAT MA0489.1 rrrrrrTGAsTCAt MA0099.3 rTGAGTCAym MA1126.1 drTgACGTCAtmmkty MA1127.1 gaTGACGTCAy MA1128.1 kkrTGACTCAtmm MA1129.1 rTgACGTcAy MA1130.1 kkrTGAGTCAym MA1131.1 grTGACGTmAt MA0462.2 waTGACTCAth MA0099.4 rTGAGTCAy MA0488.2 ATGAtGTmAT MA1126.2 rTgACGTCAt
Binding Sites:	MA0099.2.1 MA0099.2.10 MA0099.2.11 MA0099.2.12 MA0099.2.13 MA0099.2.14 MA0099.2.15 MA0099.2.16 MA0099.2.17 MA0099.2.18 MA0099.2.2 MA0099.2.3 / MA0099.2.4 MA0099.2.5 MA0099.2.6 / MA0099.2.7 MA0099.2.8 MA0099.2.9 MA0462.1.1 MA0462.1.10 MA0462.1.11 MA0462.1.12 MA0462.1.13 MA0462.1.14 MA0462.1.15 MA0462.1.16 MA0462.1.17 MA0462.1.18 / MA0462.1.19 MA0462.1.2 MA0462.1.20 MA0462.1.3 MA0462.1.4 MA0462.1.5 MA0462.1.6 MA0462.1.7 MA0462.1.8 MA0462.1.9 MA0488.1.1 MA0488.1.10 MA0488.1.11 MA0488.1.12 MA0488.1.13 MA0488.1.14 MA0488.1.15 MA0488.1.16 MA0488.1.17 MA0488.1.18 MA0488.1.19 MA0488.1.2 MA0488.1.20 MA0488.1.3 MA0488.1.4 MA0488.1.5 MA0488.1.6 MA0488.1.7 MA0488.1.8 MA0488.1.9 MA0489.1.1 MA0489.1.10 / MA0489.1.13 / MA0489.1.17 / MA0489.1.18 MA0489.1.11 MA0489.1.12 MA0489.1.14 MA0489.1.15 MA0489.1.16 MA0489.1.19 MA0489.1.2 MA0489.1.20 MA0489.1.3 MA0489.1.4 MA0489.1.5 MA0489.1.6 MA0489.1.7 MA0489.1.8 MA0489.1.9 MA0462.2.1 MA0462.2.10 / MA0462.2.5 MA0462.2.11 / MA0462.2.6 MA0462.2.12 MA0462.2.13 MA0462.2.14 MA0462.2.15 / MA0462.2.7 MA0462.2.16 MA0462.2.17 / MA0462.2.8 MA0462.2.18 MA0462.2.19 / MA0462.2.9 MA0462.2.1 / MA0462.2.2 MA0462.2.10 / MA0462.2.20 MA0462.2.2 / MA0462.2.3 MA0462.2.4 MA0462.2.3 / MA0462.2.5 MA0462.2.6 MA0462.2.4 / MA0462.2.7 MA0462.2.8 MA0462.2.9 MA0462.2.11 MA0462.2.12 MA0462.2.13 MA0462.2.14 MA0462.2.15 MA0462.2.16 MA0462.2.17 MA0462.2.18 MA0462.2.19 MA0462.2.20 MA0488.2.1 MA0488.2.10 MA0488.2.11 MA0488.2.12 MA0488.2.13 MA0488.2.14 MA0488.2.15 MA0488.2.16 MA0488.2.17 MA0488.2.18 MA0488.2.19 MA0488.2.2 MA0488.2.20 MA0488.2.3 MA0488.2.4 MA0488.2.5 MA0488.2.6 MA0488.2.7 MA0488.2.8 MA0488.2.9
Publications:	Portales-Casamar E, Kirov S, Lim J, Lithwick S, Swanson M.I, Ticoll A, Snoddy J, Wasserman W.W. PAZAR: a framework for collection and dissemination of cis-regulatory sequence annotation. Genome biology 8:R207 (2007). [Pubmed] Li M, Ge Q, Wang W, Wang J, Lu Z. c-Jun binding site identification in K562 cells. Journal of genetics and genomics = Yi chuan xue bao 38:235-42 (2011). [Pubmed] Li P, Spolski R, Liao W, Wang L, Murphy TL, Murphy KM, Leonard WJ. BATF-JUN is critical for IRF4-mediated transcription in T cells. Nature 490:543-6 (2012). [Pubmed] Shaulian E, Karin M. AP-1 as a regulator of cell life and death. Nat Cell Biol : (2002). [Pubmed]
Related annotations:	PaperBLAST

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