Transcription Factor
| Accessions: | UP00333A (UniPROBE 20160601) |
| Names: | O6257, Tea1, TY1 enhancer activator, YOR337W |
| Organisms: | Saccharomyces cerevisiae |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | P47988 |
| Description: | Ty1 enhancer activator required for full levels of Ty enhancer-mediated transcription; C6 zinc cluster DNA-binding protein |
| Length: | 139 |
| Pfam Domains: | 52-88 Fungal Zn(2)-Cys(6) binuclear cluster domain |
| Sequence: (in bold interface residues) | 1 RALSTDMTSNILSSTNASSNEENSRSSSAANVRSGTGANTLTNGGSTRKRLACTNCRNRR 60 61 KKCDLGFPCGNCSRLELVCNVNDEDLRKKRYTNKYVKSLESHIAQLETNLKNLVQKIYPD 120 121 DEQILNRMMVGDVLSALPD |
| Interface Residues: | 59, 60, 61, 87, 88, 89, 90 |
| 3D-footprint Homologues: | 1hwt_C, 1pyi_A, 6o19_A, 2er8_C, 6gys_C, 1zme_D, 1dh3_C |
| Binding Motifs: | UP00333A_1 wtcTkCGGrAwTTAAwwAyC |
| Binding Sites: | AAAGTCCG AAGCGCGC AAGTCCGA AAGTCCGC AATGTCCG AGCGCGCG ATATCCGC ATCCCCGC ATCTCCGC ATGTCCGA ATGTCCGC ATGTGCGC ATTGTCCG CCCGCGCG CCGCGCGC CCGCGCGG CGGACATA GCGCGCGC GCGCGCTA AATACCGC |
| Publications: | *Zhu C, *Byers K, *McCord RP, Shi Z, Berger MF, Newburger D, Saulrieta K, Smith Z, Shah M, Radhakrishnan M, Philippakis AA, Hu Y, De Masi F, Pacek M, Rolfs A , Murthy TVS, LaBaer J, Bulyk ML. High-Resolution DNA Binding Specificity Analysis of Yeast Transcription Factors. Genome Research. Epub January 21, 2009, doi:10.1101/gr.090233.108 (*co-1st authors). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.