Transcription Factor
| Accessions: | IDEF1 (EEADannot 2026-03-04) |
| Names: | Os08g0101000 |
| Organisms: | Oryza sativa, Oryza sativa Japonica Group |
| Libraries: | EEADannot 2026-03-04 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:B3 LAV |
| Length: | 362 |
| Pfam Domains: | 255-340 B3 DNA binding domain |
| Sequence: (in bold interface residues) | 1 MGQMDGGDGGGGGHPYHYQALLAAVHQQTVPFPNPFPAPSSGAEPPHPHNHNHNHNHNHN 60 61 IHNSHNHNHNHNAAPHPCHTPTPTPTPRGFADWSASTSAFTSLAAHSSTAPSNAVHYSFS 120 121 PCYAFWTHYMLNKNAYPTSFPAPHDDHLRLANNNHPRDAPGPASSYGVESFTSPSMAPNI 180 181 CTHMPPIEGPISAKEDKKPEILPRVVKSSDELETRNSNVEFHSETVGTLPESKQGHDSRA 240 241 TKLLNSGEYQVILRKELTKSDVGNVGRIVLPKKDAEASLPPLLQRDPLILHMDDMVLPVT 300 301 WKFKYRYWPNNKSRMYILDSAGEFLKTHGLQAGDVIIIYKNLAPGKFIIRGEKAIHQQTT 360 361 NP |
| Interface Residues: | 258, 260, 265, 266, 267, 269, 308, 310, 311, 312, 313, 315 |
| 3D-footprint Homologues: | 6j9b_A, 6j9c_D, 7et6_A, 6fas_B |
| Binding Motifs: | EEAD0046 hKCATGCwT |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.