Transcription Factor
| Accessions: | UP00076A (UniPROBE 20160601) |
| Names: | 2510005N23Rik, 9930116O05Rik, D130086K05Rik, regulatory factor X domain containing 2 homolog (human), Rfxdc2 |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | Q8CB07 |
| Description: | regulatory factor X domain containing 2 homolog (human): AK138890 |
| Length: | 109 |
| Pfam Domains: | 22-94 RFX DNA-binding domain 41-81 Poxvirus D5 protein-like |
| Sequence: (in bold interface residues) | 1 YLQLPSGLSSAEKSDQNAMSSSRAQQMHAFSWIRNTLEEHPETSLPKQEVYDEYKSYCDN 60 61 LGYHPLSAADFGKIMKNVFPNMKARRLGTRGKSKYCYSGLRKKAFVHMP |
| Interface Residues: | 69, 73, 86, 90, 95 |
| 3D-footprint Homologues: | 1dp7_P |
| Binding Motifs: | UP00076A_1 ycvCaTAGCAACsrr UP00076A_2 skrctTrGWkACsgwww |
| Binding Sites: | ACAGCAAC AGCAACCG ATAGCAAC ATGGCAAC ATGGTAAC CAGCAACC CAGCAACG CCAGCAAC CGTTACCA CGTTACTA CGTTGCCA CGTTGCTA CTAGCAAC GGCAACCA GGTTACCA GGTTGCCA GGTTGCTA GTAGCAAC GTTGCTAA TAGCAACA |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
| Related annotations: | PaperBLAST |
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