Transcription Factor
| Accessions: | CREB3L4 (HT-SELEX2 May2017) |
| Names: | CREB3L4, ENSG00000143578 |
| Organisms: | Homo sapiens |
| Libraries: | HT-SELEX2 May2017 1 1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed] |
| Notes: | TF family: bZIP experiment: HT-SELEX Hamming distance: 1 cycle: 3, TF family: bZIP experiment: Methyl-HT-SELEX Hamming distance: 1 cycle: 3 |
| Length: | 142 |
| Pfam Domains: | 61-119 bZIP transcription factor 65-114 Basic region leucine zipper |
| Sequence: (in bold interface residues) | 1 VSELPFDAHAHILPRAGTVAPVPCTTLLPCQTLFLTDEEKRLLGQEGVSLPSHLPLTKAE 60 61 ERVLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNISLV 120 121 AQLRQLQTLIAQTSNKAAQTST |
| Interface Residues: | 69, 72, 73, 74, 76, 77, 78, 79, 80, 81, 82, 83 |
| 3D-footprint Homologues: | 1gd2_G, 6mg1_B, 7x5e_F, 5t01_B, 1dh3_C, 5vpe_D, 8osl_P, 4h10_A |
| Binding Motifs: | CREB3L4_4 ygCCACGTCAyc CREB3L4_5 grTGACGTCAyc CREB3L4_6 cgmcACGTgkcm CREB3L4_methyl_1 yGCCACrTCAyc CREB3L4_methyl_2 grTGAyGTCAyc CREB3L4_methyl_3 yGMCACGTgkCm |
| Related annotations: | PaperBLAST |
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