Transcription Factor
| Accessions: | UP00070A (UniPROBE 20160601) |
| Names: | Chorion-specific transcription factor GCMa, Gcm 1, Gcm a, GCM motif protein 1, Gcm-rs2, Gcm1, Gcm1-rs1, glial cell deficient, glial cells missing homolog 1 (Drosophila), glide, mGCM1, mGCMa |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | P70348 |
| Description: | glial cells missing homolog 1 (Drosophila) |
| Length: | 174 |
| Pfam Domains: | 30-169 GCM motif protein |
| Sequence: (in bold interface residues) | 1 MELDDFDPEDKEILSWDINDVKLPQNVKTTDWFQEWPDSYVKHIYSSDDRNAQRHLSSWA 60 61 MRNTNNHNSRILKKSCLGVVVCSRDCSTEEGRKIYLRPAICDKARQKQQRKSCPNCNGPL 120 121 KLIPCRGHGGFPVTNFWRHDGRFIFFQSKGEHDHPRPETKLEAEARRAMKKVHM |
| Interface Residues: | 63, 64, 65, 67, 100 |
| 3D-footprint Homologues: | 1odh_A |
| Binding Motifs: | UP00070A_1 wmvwACCCGCATvdhk UP00070A_2 wksgmATAGGGGrsrmk |
| Binding Sites: | AACCCGCA AATGCGGG ACCCCCAT ACCCGCAC ACCCGCAG ACCCGTAT ATACGGGC ATAGGGGC ATGCGGGC ATGCGGGG CACCCGCA CATGCGGG CCCGCATA CCCGCATC CGCCCGCA CTGCGGGC GCCCGCAC TACCCGCA TGCCCGCA CCCGTATC |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.