DNA Binding Site
| Accessions: | ATGCGGGG (UniPROBE 20160601) |
| Organisms: | Mus musculus, Saccharomyces cerevisiae, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | ATGCGGGG |
| Type: | Heterodimer |
| Binding TFs: | UP00291A (Zinc finger, C2H2 type, Zinc-finger double domain) UP00070A (GCM motif protein) UP00276A (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00289A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00317A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00349A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00587B (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00587D (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) |
| Binding Motifs: | UP00070A_1 wmvwACCCGCATvdhk UP00276A_1 tkwaraCGTAAATCmtwwhh UP00289A_1 ryrwryTACCCCGCAyhwrys UP00291A_1 kwawdwAATGCGGGGkrmwwk UP00317A_1 acryrytACCCCGCAwwtwrk UP00349A_1 wyrwryTACCCCGCAwTtwrk UP00070A_2 wksgmATAGGGGrsrmk UP00587B_1 aacysaaAACACGCAwwyhywm UP00587D_1 ktstwmyCCCMCGCAhtwtyaw |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.