Transcription Factor
Accessions: | 2h8r_B (3D-footprint 20231221) |
Names: | Hepatocyte nuclear factor 1-beta, HNF-1-beta, HNF-1B, HNF1B_HUMAN, Homeoprotein LFB3, TCF-2, Transcription factor 2, Variant hepatic nuclear factor 1, vHNF1 |
Organisms: | Homo sapiens |
Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
Uniprot: | P35680 |
Length: | 176 |
Pfam Domains: | 2-93 Hepatocyte nuclear factor 1 (HNF-1), N terminus 98-171 Homeobox domain |
Sequence: (in bold interface residues) | 1 SILKELQALNTEEAAEQRAEVDRMLSEDPWRAAKMIKGYMQQHNIPQREVVDVTGLNQSH 60 61 LSQHLNKGTPMKTQKRAALYTWYVRKQREILRQFNQMRRNRFKWGPASQQILYQAYDRQK 120 121 NPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLVTEVRVYNWFANRRKEEAFR |
Interface Residues: | 57, 58, 59, 60, 62, 63, 69, 70, 79, 98, 101, 161, 162, 163, 164, 167, 168, 171 |
3D-footprint Homologues: | 2h8r_B, 1ic8_B, 4on0_B, 1fjl_B, 5zfz_A, 4j19_B, 1le8_A |
Binding Motifs: | 2h8r_AB tGGTGAATtATTAAC 2h8r_B TAATnntTcACCa |
Binding Sites: | 2h8r_E 2h8r_F |
Publications: | Lu P, Rha G.B, Chi Y.I. Structural basis of disease-causing mutations in hepatocyte nuclear factor 1beta. Biochemistry 46:12071-80 (2007). [Pubmed] |
Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.