Transcription Factor
| Accessions: | CUP-SHAPED-COTYLEDON1 (EEADannot 2026-03-04) |
| Names: | CARHR090150 |
| Organisms: | Cardamine hirsuta |
| Libraries: | EEADannot 2026-03-04 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:GCM domain factors NAC |
| Length: | 305 |
| Pfam Domains: | 20-147 No apical meristem (NAM) protein |
| Sequence: (in bold interface residues) | 1 MDIVVFNGSERPRFEDDTLMPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVNLNKS 60 61 EPWELPEKAKMGEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLG 120 121 MKKTLVFYKGRAPKGEKSSWVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKSGVVNRET 180 181 KSISSSTSAAGEFSSAGSTIAPIIDAFASEHVSCFSNDAAHANESFRTTYLPAPPPSLPP 240 241 RQPRHIGDDVAFGQFMDFGSSGQIHYDAAAFFPNLPSLPPTALPPPPSFAMYGGGSTMSY 300 301 WPFAL |
| Interface Residues: | 86, 91, 93, 102, 104, 106, 128, 132, 133, 134, 137 |
| 3D-footprint Homologues: | 7xp3_B, 3swp_A |
| Binding Motifs: | EEAD0152 CTCsRCCr EEAD0153 CAmGyAA |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.