Transcription Factor

						

			
Accessions: 4r2e_A (3D-footprint 20231221), 5kl2_A (3D-footprint 20231221)

			
Names: Wilms tumor protein, isoform 4/CRA_a, WT1_HUMAN, WT33, Wilms tumor protein
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: P19544
Length: 88
Pfam Domains:      4-28 C2H2-type zinc finger
     4-28 Zinc finger, C2H2 type
    21-45 Zinc-finger double domain
    34-56 C2H2-type zinc finger
    34-56 Zinc finger, C2H2 type
    34-54 Zinc-finger of C2H2 type
    48-74 Zinc-finger double domain
    62-84 C2H2-type zinc finger
    62-86 Zinc finger, C2H2 type
Sequence: 
(in bold interface residues)		   1 EKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEK   60
  61 PFSCRWPSCQKKFARSDELVRHHNMHQR
Interface Residues: 16, 17, 18, 19, 20, 22, 23, 44, 45, 46, 47, 48, 50, 51, 52, 70, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82
3D-footprint Homologues: 6jnm_A, 8cuc_F, 1tf3_A, 7y3l_A, 6ml4_A, 7n5w_A, 1tf6_A, 6u9q_A, 4x9j_A, 2i13_A, 5kl3_A, 2wbs_A, 1ubd_C, 7ysf_A, 5ei9_F, 2jpa_A, 8ssq_A, 1mey_C, 7w1m_H, 5und_A, 2drp_D, 1f2i_J, 7eyi_G, 5k5i_A, 2kmk_A, 8ssu_A, 2gli_A, 1g2f_F, 6blw_A, 5kkq_D, 8h9h_G, 5v3j_F, 7y3m_I, 6e94_A, 6wmi_A, 2lt7_A, 6a57_A, 8gn3_A, 3uk3_C, 5yel_A, 1llm_D, 7txc_E, 5yj3_D, 4m9v_C
Binding Motifs: 4r2e_A GCGTGGGcGG
5kl2_A aCTCCCACGC
Binding Sites: 4r2e_C
5kl2_B
5kl2_C
4r2e_B
			
Publications: Hashimoto H, Olanrewaju Y.O, Zheng Y, Wilson G.G, Zhang X, Cheng X. Wilms tumor protein recognizes 5-carboxylcytosine within a specific DNA sequence. Genes & development 28:2304-13 (2014). [Pubmed]


Hashimoto H, Zhang X, Zheng Y, Wilson GG, Cheng X. Denys-Drash syndrome associated WT1 glutamine 369 mutants have altered sequence-preferences and altered responses to epigenetic modifications. Nucleic Acids Res 44:10165-10176 (2016). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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