Transcription Factor

						

			
Accessions: 6fas_B (3D-footprint 20231221)

			
Names: B3 domain-containing transcription repressor VAL1, Protein HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE 2, Protein VP1/ABI3-LIKE 1, VAL1_ARATH
Organisms: Arabidopsis thaliana
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 109
Pfam Domains:     9-106 B3 DNA binding domain
Sequence: 
(in bold interface residues)		   1 MNLNIVPLFEKTLSASDAGRIGRLVLPKAAEAYFPPISQSEGIPLKIQDVRGREWTFQFR   60
  61 YWPNNNSRMYVLEGVTPCIQSMMLQAGDTVTFSRVDPGGKLIMGSRKAA
Interface Residues: 14, 16, 21, 22, 23, 25, 60, 62, 63, 64, 65, 66, 67, 68, 69
3D-footprint Homologues: 6j9b_A, 6j9c_D, 6sdg_B, 6fas_B, 7et6_A
Binding Motifs: 6fas_B CATgC
Binding Sites: 6fas_E
6fas_F
			
Publications: Sasnauskas G, Kauneckaite K, Siksnys V. Structural basis of DNA target recognition by the B3 domain of Arabidopsis epigenome reader VAL1. Nucleic Acids Res 46:4316-4324 (2018). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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