Transcription Factor

Accessions: 2ypa_A (3D-footprint 20231221)
Names: bHLHa17, Class A basic helix-loop-helix protein 17, Stem cell protein, T-CELL ACUTE LYMPHOCYTIC LEUKEMIA PROTEIN 1, T-cell leukemia/lymphoma protein 5, TAL-1, TAL1_HUMAN
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: P17542
Length: 67
Pfam Domains: 7-58 Helix-loop-helix DNA-binding domain
Sequence:
(in bold interface residues)
1 PHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAK 60
61 LLNDQEE
Interface Residues: 8, 11, 12, 14, 15, 16, 18, 19, 44
3D-footprint Homologues: 7z5k_B, 2ypa_A, 6od3_F, 1am9_A, 2ql2_D, 2ypa_B, 2ql2_A, 7ssa_L, 6g1l_A, 8osl_P, 7d8t_A, 4h10_A
Binding Motifs: 2ypa_AB cCAnnTGt
Publications: El Omari K, Hoosdally S.J, Tuladhar K, Karia D, Hall-Ponselé E, Platonova O, Vyas P, Patient R, Porcher C, Mancini E.J. Structural basis for LMO2-driven recruitment of the SCL:E47bHLH heterodimer to hematopoietic-specific transcriptional targets. Cell reports 4:135-47 (2013). [Pubmed]
Related annotations: PaperBLAST

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