Transcription Factor

Accessions: 5gnj_A (3D-footprint 20231221)
Names: AtbHLH6, AtMYC2, Basic helix-loop-helix protein 6, bHLH 6, bHLH transcription factor bHLH006, MYC2_ARATH, Protein JASMONATE INSENSITIVE 1, R-homologous Arabidopsis protein 1, RAP-1, rd22BP1, Transcription factor EN 38, Transcription factor MYC2, Z-box binding factor 1 protein
Organisms: Arabidopsis thaliana
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: Q39204
Length: 74
Pfam Domains: 1-46 Helix-loop-helix DNA-binding domain
Sequence:
(in bold interface residues)
1 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESEKLQI 60
61 KNQLEEVKLELAGR
Interface Residues: 2, 3, 5, 6, 9, 10, 14, 30, 32
3D-footprint Homologues: 7xq5_A, 4h10_A, 7rcu_E, 5gnj_I, 5v0l_A, 4zpk_A, 7ssa_L, 5i50_B, 6g1l_A, 7xi3_A, 5nj8_D, 7d8t_A, 5eyo_A, 8osl_P, 1an4_A, 5sy7_B, 7z5k_B, 4zpr_B
Binding Motifs: 5gnj_AB taCACGTG
Publications: Lian TF, Xu YP, Li LF, Su XD. Crystal Structure of Tetrameric Arabidopsis MYC2 Reveals the Mechanism of Enhanced Interaction with DNA. Cell Rep 19:1334-1342 (2017). [Pubmed]
Related annotations: PaperBLAST

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