Transcription Factor

						

			
Accessions: 4egy_A (3D-footprint 20231221), 4egz_A (3D-footprint 20231221), 4h0e_B (3D-footprint 20231221)

			
Names: Arabinose metabolism transcriptional repressor, ARAR_BACSU
Organisms: Bacillus subtilis, strain 168
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: P96711
Length: 81
Pfam Domains:     17-80 Bacterial regulatory proteins, gntR family
    44-75 HTH domain
    44-78 DeoR-like helix-turn-helix domain
Sequence: 
(in bold interface residues)		   1 LEVLFQGPLGSEFMLPKYAQVKEEISSWINQGKILPDQKIPTENELMQQFGVSRHTIRKA   60
  61 IGDLVSQGLLYSVQGGGTFVA
Interface Residues: 18, 42, 43, 44, 47, 53, 54, 55, 56, 57, 58, 59, 74, 75
3D-footprint Homologues: 7zla_B, 6wg7_G, 4h0e_A, 4p9u_F, 4wwc_B, 4u0y_B, 1h9t_B, 6za3_B
Binding Motifs: 4egy_AB TGyACGAaCA
4egz_AB aTGTnnATnnACA
4h0e_AB TGtaCGGaCA
Binding Sites: 4h0e_T
4h0e_U
			
Publications: Jain D, Nair D.T. Spacing between core recognition motifs determines relative orientation of AraR monomers on bipartite operators. Nucleic acids research 41:639-47 (2013). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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