Transcription Factor
| Accessions: | UP00065A (UniPROBE 20160601) |
| Names: | ZF5, Zfp-161, Zfp-5, Zfp161, Zfp5, zinc finger protein 161, Zinc finger protein 5 |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | Q08376 |
| Description: | zinc finger protein 161: Mus musculus zinc finger protein 161 |
| Length: | 166 |
| Pfam Domains: | 17-38 C2H2-type zinc finger 18-38 Zinc finger, C2H2 type 31-55 Zinc-finger double domain 44-66 Zinc finger, C2H2 type 44-64 Zinc-finger of C2H2 type 44-66 C2H2-type zinc finger 58-81 Zinc-finger double domain 72-92 Zinc-finger of C2H2 type 72-94 C2H2-type zinc finger 72-94 Zinc finger, C2H2 type 86-111 Zinc-finger double domain 100-122 C2H2-type zinc finger 100-120 Zinc-finger of C2H2 type 100-122 Zinc finger, C2H2 type 114-138 Zinc-finger double domain 128-151 C2H2-type zinc finger 128-151 Zinc finger, C2H2 type |
| Sequence: (in bold interface residues) | 1 DMKFEYLLYGHHREQIACQACGKTFSDEGRLRKHEKLHTADRPFVCEMCTKGFTTQAHLK 60 61 EHLKIHTGYKPYSCEVCGKSFIRAPDLKKHERVHSNERPFACHMCDKAFKHKSHLKDHER 120 121 RHRGEKPFVCGSCTKAFAKASDLKRHENNMHSERKQVTPSAIQSET |
| Interface Residues: | 26, 27, 28, 29, 30, 33, 37, 44, 54, 55, 56, 57, 58, 60, 61, 62, 63, 64, 65, 67, 82, 83, 84, 85, 86, 87, 88, 89, 90, 92, 93, 110, 111, 112, 113, 114, 115, 116, 117, 138, 139, 140, 141, 142, 144, 145 |
| 3D-footprint Homologues: | 1tf3_A, 6jnm_A, 8cuc_F, 7y3l_A, 5v3j_F, 7n5w_A, 6wmi_A, 8ssq_A, 7w1m_H, 1g2f_F, 8ssu_A, 1tf6_A, 4x9j_A, 5kkq_D, 8h9h_G, 2i13_A, 7y3m_I, 6a57_A, 2kmk_A, 5ei9_F, 1mey_C, 7txc_E, 1f2i_J, 5yj3_D, 5k5i_A, 5und_A, 2gli_A, 6ml4_A, 8gn3_A, 1llm_D, 6blw_A, 4m9v_C, 7eyi_G, 6e94_A, 7ysf_A, 2jpa_A, 1ubd_C, 3uk3_C, 6u9q_A, 5yel_A, 5kl3_A, 5k5l_F, 2wbs_A, 2lt7_A, 2drp_D |
| Binding Motifs: | UP00065A_1 kgrcGCGCGCryyyrw UP00065A_2 gyCGCGCArkGCrt |
| Binding Sites: | ACGCGCAT ACGCGCGC AGCGCGCG AGGCGCGC ATGCGCGC CACGCGCA CACGCGCG CCGCGCGC CGCGCGCA CGCGCGCC CGCGCGCG CGGCGCGC GAGCGCGC GCACGCGC GCGCGCAC GCGCGCCC GCGCGCGA GCGCGCGC GGCGCGCA GGCGCGCC |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.