Transcription Factor
| Accessions: | SigX (DBTBS 1.0) |
| Names: | SigX, SIGX_BACSU |
| Organisms: | Bacillus subtilis |
| Libraries: | DBTBS 1.0 1 1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed] |
| Uniprot: | P35165 |
| Length: | 194 |
| Pfam Domains: | 8-74 Sigma-70 region 2 26-164 ECF sigma factor 110-159 Sigma-70, region 4 114-163 Sigma-70, region 4 |
| Sequence: (in bold interface residues) | 1 MEETFQLLYDTYHQDLYQFLFYMVKDKNQTEDLLQEVYIRVLNSYHTFEGRSSEKTWLLS 60 61 IARHVAIDWFRKQQTIRQRILGTFDWDTQDVRDQQLLPDELAVQHENVREIYAALDQCTI 120 121 DQRAVIILRFIQGYSIQETAKALRFSESKVKTTQHRGLKVLRKHMELLREELMDDEVRME 180 181 RRTDKGVVKSTSGS |
| Interface Residues: | 40, 44, 48, 49, 51, 52, 55, 56, 57, 59, 60, 61, 64, 68, 136, 149, 151, 152, 155, 156 |
| 3D-footprint Homologues: | 4lup_A, 7rcf_A, 6jhe_A |
| Binding Motifs: | SigX_1 TGwAAC SigX_2 CGTCWA |
| Binding Sites: | abh_2 csbB_2 divIC_2 dltA_2 lytR_2 pbpX_2 pssA_3 rapD_2 sigX_2 yjbC_3 yqjL_2 yrhH_2 ywbN_2 ywnJ_3 ywoA_2 |
| Related annotations: | PaperBLAST |
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