DNA Binding Site

Accessions: rapD_2 (DBTBS 1.0)
Names: rapD_2
Organisms: Bacillus subtilis
Libraries: DBTBS 1.0 1
1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed]
Length: 42
Sequence: aaTGTAACCAactgtcaatgagagcCGTCAAaagttatgata
Binding TFs: SigX (Sigma-70 region 2 , Sigma-70, region 4, ECF sigma factor, Sigma-70, region 4)
Binding Motifs: SigX_1 TGwAAC
SigX_2 CGTCWA
Publications: Huang X, Helmann J.D. Identification of target promoters for the Bacillus subtilis sigma X factor using a consensus-directed search. Journal of molecular biology 279:165-73 (1998). [Pubmed]

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