Transcription Factor

Accessions: UP00529A (UniPROBE 20160601)
Names: Fox3_Mgra, M.gra Fox3
Organisms: Zymoseptoria tritici
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 114
Pfam Domains: 16-94 Fork head domain
Sequence:
(in bold interface residues)
1 SPIKPESAFTEEELKKPNMTYIYIIDEVLQNIEGGQADLQAIYDKIMKRWPYYKYKVGSL 60
61 GWQSSVRHNLLSCERFRDAGKSGKGKLWAINHEHPLDNKKRKPTPPPRPPVPMQ
Interface Residues: 39, 60, 61, 63, 64, 65, 67, 68, 69, 71, 72, 73, 77, 84
3D-footprint Homologues: 8vfz_O, 8bzm_E, 7vox_H, 2hdc_A, 2c6y_A, 7yze_A, 7cby_C, 7yzg_A, 7tdw_A, 7yz7_A, 3g73_A, 7tdx_A, 2a07_J, 7yzb_A, 6el8_A, 7vou_C, 8sro_B
Binding Motifs: UP00529A_1 dhkwmkaACGCACAmwadmcgc
UP00529A_2 tybsmssgtGssCacyrrgsaw
Binding Sites: GCACACAA
GCACACAC
GTGCGCAC
TGCGCACA
AACGCACA
ACACACAA
ACCCACAA
ACGCACAA
ACGCACAC
AGTGTGCG
CACACAAA
CACACACA
CACGCACA
CCACACAC
CCCACACA
CGCACAAA
CGCACACA
CGCGCACA
GAACGCAC
GCGCACAA
Publications: Nakagawa S, Gisselbrecht SS, Rogers JM, Hartl DL, Bulyk ML. DNA-binding specificity changes in the evolution of forkhead transcription factors. Proc Natl Acad Sci U S A 110:12349-54 (2013). [Pubmed]
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.