Transcription Factor
| Accessions: | Q9M7Q2 (JASPAR 2024) |
| Names: | ABA-responsive element-binding protein 2, ABRE-binding factor 4, Abscisic acid responsive elements-binding factor 4, ABSCISIC ACID-INSENSITIVE 5-like protein 7, AI5L7_ARATH, AtbZIP38, bZIP transcription factor 38 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 431 |
| Pfam Domains: | 352-400 Basic region leucine zipper 353-404 bZIP transcription factor |
| Sequence: (in bold interface residues) | 1 MGTHINFNNLGGGGHPGGEGSSNQMKPTGSVMPLARQSSVYSLTFDELQNTLGGPGKDFG 60 61 SMNMDELLKSIWTAEEAQAMAMTSAPAATAVAQPGAGIPPPGGNLQRQGSLTLPRTISQK 120 121 TVDEVWKCLITKDGNMEGSSGGGGESNVPPGRQQTLGEMTLEEFLFRAGVVREDNCVQQM 180 181 GQVNGNNNNGFYGNSTAAGGLGFGFGQPNQNSITFNGTNDSMILNQPPGLGLKMGGTMQQ 240 241 QQQQQQLLQQQQQQMQQLNQPHPQQRLPQTIFPKQANVAFSAPVNITNKGFAGAANNSIN 300 301 NNNGLASYGGTGVTVAATSPGTSSAENNSLSPVPYVLNRGRRSNTGLEKVIERRQRRMIK 360 361 NRESAARSRARKQAYTLELEAEIEKLKKTNQELQKKQAEMVEMQKNELKETSKRPWGSKR 420 421 QCLRRTLTGPW |
| Interface Residues: | 334, 335, 337, 338, 341, 342, 354, 357, 358, 360, 361, 362, 364, 365, 368, 369 |
| 3D-footprint Homologues: | 5i50_B, 6mg1_B, 4eot_A, 7x5e_E, 2wt7_A, 7x5e_F, 2wt7_B, 5vpe_C, 1dh3_C, 8k86_A, 2dgc_A, 5t01_B |
| Binding Motifs: | MA1659.1 tkCCACGTswyh MA1659.2 CCACGTs |
| Binding Sites: | MA1659.1.1 MA1659.1.10 MA1659.1.11 MA1659.1.12 / MA1659.1.8 MA1659.1.13 / MA1659.1.9 MA1659.1.10 / MA1659.1.14 MA1659.1.15 MA1659.1.11 / MA1659.1.16 MA1659.1.17 MA1659.1.18 MA1659.1.12 / MA1659.1.19 MA1659.1.1 / MA1659.1.2 MA1659.1.13 / MA1659.1.20 MA1659.1.3 MA1659.1.4 / MA1659.1.5 MA1659.1.6 MA1659.1.7 MA1659.1.8 / MA1659.1.9 MA1659.1.14 MA1659.1.15 MA1659.1.16 MA1659.1.17 MA1659.1.18 MA1659.1.19 MA1659.1.2 MA1659.1.20 MA1659.2.1 MA1659.2.10 / MA1659.2.13 / MA1659.2.20 MA1659.2.11 / MA1659.2.6 MA1659.2.12 / MA1659.2.15 / MA1659.2.16 / MA1659.2.19 / MA1659.2.3 / MA1659.2.7 MA1659.2.14 / MA1659.2.18 / MA1659.2.4 / MA1659.2.5 MA1659.2.17 MA1659.2.2 MA1659.2.8 MA1659.2.9 |
| Publications: | Sullivan AM, Arsovski AA, Lempe J, Bubb KL, Weirauch MT, Sabo PJ, Sandstrom R, Thurman RE, Neph S, Reynolds AP, Stergachis AB, Vernot B, Johnson AK, Haugen E, Sullivan ST, Thompson A, Neri FV 3rd, Weaver M, Diegel M, Mnaimneh S, Yang A, Hughes TR, Nemhauser JL, Queitsch C, Stamatoyannopoulos JA. Mapping and dynamics of regulatory DNA and transcription factor networks in A. thaliana 8:2015-2030 (Cell). [Pubmed] |
| Related annotations: | PaperBLAST |
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