DNA Binding Motif
| Accessions: | MA1659.2 (JASPAR 2024) |
| Names: | ABF4 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 7 |
| Consensus: | CCACGTs |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 660 5169 62 155 C 02 135 5763 86 62 C 03 5906 20 47 73 A 04 175 5666 44 161 C 05 210 166 5470 200 G 06 121 58 52 5815 T 07 610 3358 1825 253 s |
| Type: | Heterodimer |
| Binding TFs: | Q9M7Q2 (bZIP transcription factor, Basic region leucine zipper) Q9M7Q2 |
| Binding Sites: | MA1659.2.1 MA1659.2.10 / MA1659.2.13 / MA1659.2.20 MA1659.2.11 / MA1659.2.6 MA1659.2.12 / MA1659.2.15 / MA1659.2.16 / MA1659.2.19 / MA1659.2.3 / MA1659.2.7 MA1659.2.14 / MA1659.2.18 / MA1659.2.4 / MA1659.2.5 MA1659.2.17 MA1659.2.2 MA1659.2.8 MA1659.2.9 |
| Publications: | Sullivan AM, Arsovski AA, Lempe J, Bubb KL, Weirauch MT, Sabo PJ, Sandstrom R, Thurman RE, Neph S, Reynolds AP, Stergachis AB, Vernot B, Johnson AK, Haugen E, Sullivan ST, Thompson A, Neri FV 3rd, Weaver M, Diegel M, Mnaimneh S, Yang A, Hughes TR, Nemhauser JL, Queitsch C, Stamatoyannopoulos JA. Mapping and dynamics of regulatory DNA and transcription factor networks in A. thaliana 8:2015-2030 (Cell). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.