DNA Binding Site

Accessions: 6ide_C (3D-footprint 20231221)
Organisms: Vibrio cholerae
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 18
Sequence: AGGGGGGAAATCCCCCCT
Binding TFs: 6ide_B (Bacterial regulatory proteins, luxR family, PAS fold)
Binding Motifs: 6ide_AB GGGgnnnncCcC
Publications: Wu H, Li M, Guo H, Zhou H, Li B, Xu Q, Xu C, Yu F, He J. Crystal structure of the Vibrio cholerae VqmA-ligand-DNA complex provides insight into ligand-binding mechanisms relevant for drug design. J Biol Chem 294:2580-2592 (2019). [Pubmed]

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