DNA Binding Motif

						

			
Accessions: IRF5_2 (HT-SELEX2 May2017)

			
Names: IRF5
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 14
Consensus: cCGAAACCGAaACy
Weblogo: 
PSSM: P0      A      C      G      T
01    555    904    447    415      c
02    195   1861     68    460      C
03    239    117   2321     90      G
04   2321    230    121    115      A
05   2321    222    192    633      A
06   2321     31     21     26      A
07    108   2321    328    117      C
08    162   2321     18    295      C
09    322     18   2321     19      G
10   2321    194    106     52      A
11   2321     64    268    870      a
12   2321     42     15     75      A
13    191   2321    536    105      C
14    433   1165    340   1156      y
Binding TFs: IRF5 (Interferon regulatory factor transcription factor)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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