DNA Binding Motif

						

			
Accessions: MA0971.1 (JASPAR 2024)

			
Names: DREB1A
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 10
Consensus: atGTCGGyrr
Weblogo: 
PSSM: P0      A      C      G      T
01    590    118    126    166      a
02    139    159    137    565      t
03      2      0    997      1      G
04     10     14      3    973      T
05      5    991      4      1      C
06      0      0    994      6      G
07     48      0    948      3      G
08     16    504     19    461      y
09    341    240    279    140      r
10    322    205    322    152      r
Type: Heterodimer
Binding TFs: Q9M0L0 (AP2 domain)
Q9M0L0
Binding Sites: MA0971.1.1
MA0971.1.10 / MA0971.1.12
MA0971.1.11
MA0971.1.13
MA0971.1.14 / MA0971.1.15
MA0971.1.16
MA0971.1.17
MA0971.1.18
MA0971.1.19
MA0971.1.2
MA0971.1.20
MA0971.1.3
MA0971.1.4
MA0971.1.5
MA0971.1.6 / MA0971.1.7
MA0971.1.8
MA0971.1.9
			
Publications: Medina J, Bargues M, Terol J, Pérez-Alonso M, Salinas J. The Arabidopsis CBF gene family is composed of three genes encoding AP2 domain-containing proteins whose expression Is regulated by low temperature but not by abscisic acid or dehydration. Plant Physiol 119:463-70 (1999). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.