DNA Binding Motif

						

			
Accessions: 5szx_AB (3D-footprint 20231221)

			
Names: Zta transcription factor
Organisms: Epstein-Barr virus (strain B95-8) (HHV-4), Human herpesvirus 4
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Epstein-Barr virus Zta DNA binding domain homodimer in complex with methylated DNA
Length: 7
Consensus: tTGCTCA
Weblogo: 
PSSM: P0      A      C      G      T
01     20     19     19     38      t
02      0      0      0     96      T
03      0      0     96      0      G
04      0     96      0      0      C
05      0     19      0     77      T
06      0     96      0      0      C
07     96      0      0      0      A
Binding TFs: 5szx_A / 5szx_B (bZIP transcription factor)
Binding Sites: 5szx_C
5szx_D
			
Publications: Hong S, Wang D, Horton JR, Zhang X, Speck SH, Blumenthal RM, Cheng X. Methyl-dependent and spatial-specific DNA recognition by the orthologous transcription factors human AP-1 and Epstein-Barr virus Zta. Nucleic Acids Res 45:2503-2515 (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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