DNA Binding Motif
| Accessions: | MA0745.2 (JASPAR 2024) |
| Names: | SNAI2 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 13 |
| Consensus: | aygCACCTGTmry |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 14658 10031 11169 9958 a 02 7668 12314 9490 16344 y 03 10322 6393 26742 2359 g 04 408 44463 323 622 C 05 44963 202 424 227 A 06 112 45144 326 234 C 07 246 44739 487 344 C 08 78 313 196 45229 T 09 179 254 45257 126 G 10 814 6467 1263 37272 T 11 12017 18771 6281 8747 m 12 13586 11016 12297 8917 r 13 6215 13476 8219 17906 y |
| Type: | Heterodimer |
| Binding TFs: | O43623 (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger) O43623 |
| Binding Sites: | MA0745.2.14 MA0745.2.15 MA0745.2.6 / MA0745.2.8 MA0745.2.7 / MA0745.2.9 MA0745.2.10 MA0745.2.1 MA0745.2.11 / MA0745.2.8 MA0745.2.12 MA0745.2.13 / MA0745.2.9 MA0745.2.10 / MA0745.2.14 MA0745.2.11 / MA0745.2.15 MA0745.2.16 MA0745.2.17 MA0745.2.18 MA0745.2.12 / MA0745.2.19 MA0745.2.1 / MA0745.2.2 MA0745.2.20 MA0745.2.3 MA0745.2.2 / MA0745.2.4 MA0745.2.3 / MA0745.2.5 MA0745.2.4 / MA0745.2.6 MA0745.2.5 / MA0745.2.7 MA0745.2.16 / MA0745.2.18 MA0745.2.13 MA0745.2.17 MA0745.2.19 MA0745.2.20 |
| Publications: | Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed] |
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