DNA Binding Motif

						

			
Accessions: CEBPD_DBD (HumanTF 1.0), MA0836.1 (JASPAR 2024)

			
Names: CEBPD
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1, JASPAR 2024 2
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 3, HT-SELEX
Length: 10
Consensus: rTTrCGCAAy
Weblogo: 
PSSM: P0      A      C      G      T
01   3674   1257   1910    222      r
02      0      0      2   7063      T
03      1      1    753   7063      T
04   3395      5   3668    702      r
05     88   7063     34    613      C
06    814     84   7063     74      G
07    832   7063      3    724      C
08   7063    139      0      5      A
09   7063      0      0      0      A
10     54   3001    220   4062      y
Type: Heterodimer
Binding TFs: CEBPD_DBD (bZIP transcription factor, Basic region leucine zipper)
P49716 (bZIP transcription factor, Basic region leucine zipper)
P49716
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]


Osada S, Yamamoto H, Nishihara T, Imagawa M. DNA binding specificity of the CCAAT/enhancer-binding protein transcription factor family. J Biol Chem 271:3891-6 (1996). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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