DNA Binding Motif

Accessions: MA2119.1 (JASPAR 2024)
Names: HOXA3
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 7
Consensus: sTMATTA
Weblogo:
PSSM: P0 A C G T
01 93 1246 1294 138 s
02 0 502 0 2540 T
03 2540 1022 10 0 M
04 2540 0 0 0 A
05 0 0 0 2540 T
06 0 0 517 2540 T
07 2540 0 361 0 A
Type: Heterodimer
Binding TFs: O43365 (Homeobox domain, Domain of unknown function (DUF4074))
O43365
Publications: Jaeger SA, Chan ET, Berger MF, Stottmann R, Hughes TR, Bulyk ML. Conservation and regulatory associations of a wide affinity range of mouse transcription factor binding sites. Genomics 95:185-95 (2010). [Pubmed]

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