DNA Binding Motif

						

			
Accessions: 4h10_B (3D-footprint 20231221)

			
Names: Circadian locomoter output cycles protein kaput
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Intermolecular recognition revealed by the complex structure of human CLOCK-BMAL1 basic Helix-Loop-Helix domains with E-box DNA
Length: 4
Consensus: CAcg
Weblogo: 
PSSM: P0      A      C      G      T
01      0     96      0      0      C
02     96      0      0      0      A
03     13     54     13     16      c
04     13     13     57     13      g
Binding TFs: 4h10_B (Helix-loop-helix DNA-binding domain)
Binding Sites: 4h10_C
4h10_D
			
Publications: Wang Z, Wu Y, Li L, Su X.D. Intermolecular recognition revealed by the complex structure of human CLOCK-BMAL1 basic helix-loop-helix domains with E-box DNA. Cell research : (2012). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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