DNA Binding Motif

						

			
Accessions: MA0490.3 (JASPAR 2024)

			
Names: JUNB
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 9
Consensus: ATGACTCAT
Weblogo: 
PSSM: P0      A      C      G      T
01  56607   7817  11566   3866      A
02    538    654    322  78342      T
03    770    550  74757   3779      G
04  78101    523    550    682      A
05   4755  59784  10519   4798      C
06   1999    289    913  76655      T
07   5243  73199    617    797      C
08  77675    588    900    693      A
09   3722   8876   7508  59750      T
Type: Heterodimer
Binding TFs: P17275 (bZIP transcription factor, Jun-like transcription factor, Basic region leucine zipper)
P17275
Binding Sites: MA0490.3.1
MA0490.3.8
MA0490.3.7
MA0490.3.9
MA0490.3.10
MA0490.3.11 / MA0490.3.18
MA0490.3.12
MA0490.3.13
MA0490.3.2
MA0490.3.5 / MA0490.3.6
MA0490.3.4
MA0490.3.14 / MA0490.3.17
MA0490.3.15 / MA0490.3.16
MA0490.3.19
MA0490.3.20
MA0490.3.3
			
Publications: Colin L, Vandenhoudt N, de Walque S, Van Driessche B, Bergamaschi A, Martinelli V, Cherrier T, Vanhulle C, Guiguen A, David A, Burny A, Herbein G, Pancino G, Rohr O, Van Lint C. The AP-1 binding sites located in the pol gene intragenic regulatory region of HIV-1 are important for viral replication. PloS one 6:e19084 (2011). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.