DNA Binding Motif

						

			
Accessions: POU5F1P1_DBD_2 (HumanTF 1.0)

			
Names: POU5F1P1
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 3
Length: 12
Consensus: wTGmATATkCAw
Weblogo: 
PSSM: P0      A      C      G      T
01   6679    932    650   3289      w
02   2030    554    366   9968      T
03   2190    325   7778    529      G
04   6160   3808    142    213      m
05   9968    220    299    859      A
06    844    148     73   9968      T
07   9968     39     42    501      A
08   1366    296    212   9968      T
09    314    122   5810   4159      k
10    629   8068    333   1901      C
11   9968    228    336   1081      A
12   5341    639    889   4628      w
Binding TFs: POU5F1P1_DBD (Homeobox domain, Pou domain - N-terminal to homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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