DNA Binding Motif
| Accessions: | MA0152.2 (JASPAR 2024) |
| Names: | Nfatc2 |
| Organisms: | Mus musculus |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 16 |
| Consensus: | wdgmaATGGAAAmwwt |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 973 691 739 836 w 02 886 658 884 811 d 03 728 554 1430 527 g 04 828 1019 662 730 m 05 2166 460 292 321 a 06 2583 206 329 121 A 07 170 124 101 2844 T 08 78 17 3118 26 G 09 33 27 3133 46 G 10 3095 38 65 41 A 11 3140 19 45 35 A 12 2944 104 79 112 A 13 959 1105 566 609 m 14 978 406 390 1465 w 15 937 622 751 929 w 16 788 777 551 1123 t |
| Type: | Heterodimer |
| Binding TFs: | Q60591 (Rel homology domain (RHD), IPT/TIG domain) Q60591 |
| Binding Sites: | MA0152.2.1 MA0152.2.10 MA0152.2.11 / MA0152.2.13 MA0152.2.12 / MA0152.2.14 MA0152.2.13 / MA0152.2.15 MA0152.2.14 / MA0152.2.16 MA0152.2.15 / MA0152.2.18 MA0152.2.16 MA0152.2.17 MA0152.2.18 MA0152.2.19 MA0152.2.2 MA0152.2.20 MA0152.2.3 / MA0152.2.4 MA0152.2.4 / MA0152.2.5 MA0152.2.5 / MA0152.2.6 MA0152.2.6 / MA0152.2.7 MA0152.2.7 MA0152.2.10 / MA0152.2.8 MA0152.2.11 / MA0152.2.9 MA0152.2.12 MA0152.2.17 MA0152.2.19 MA0152.2.20 MA0152.2.3 MA0152.2.8 MA0152.2.9 |
| Publications: | Portales-Casamar E, Kirov S, Lim J, Lithwick S, Swanson M.I, Ticoll A, Snoddy J, Wasserman W.W. PAZAR: a framework for collection and dissemination of cis-regulatory sequence annotation. Genome biology 8:R207 (2007). [Pubmed] |
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