DNA Binding Motif

						

			
Accessions: MA1779.1 (JASPAR 2024)

			
Names: MYB83
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: DAP-seq
Length: 11
Consensus: yCACCAACmmc
Weblogo: 
PSSM: P0      A      C      G      T
01    130    508 96.927    265      y
02    109    811  4.728  75.65      C
03   1000      0      0      0      A
04    232    759  9.456      0      C
05      0    993      0  7.092      C
06  848.7 14.184  7.092    130      A
07    823    125 52.009      0      A
08    184    801 14.184      0      C
09 290.78    489 16.548 203.31      m
10    314    253    191    241      m
11    187 557.92 66.194    189      c
Type: Heterodimer
Binding TFs: Q9C6U1 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
Q9C6U1
			
Publications: Sullivan AM, Arsovski AA, Lempe J, Bubb KL, Weirauch MT, Sabo PJ, Sandstrom R, Thurman RE, Neph S, Reynolds AP, Stergachis AB, Vernot B, Johnson AK, Haugen E, Sullivan ST, Thompson A, Neri FV 3rd, Weaver M, Diegel M, Mnaimneh S, Yang A, Hughes TR, Nemhauser JL, Queitsch C, Stamatoyannopoulos JA. Mapping and dynamics of regulatory DNA and transcription factor networks in A. thaliana 8:2015-2030 (Cell). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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