DNA Binding Motif

						

			
Accessions: FERD3L_4 (HT-SELEX2 May2017)

			
Names: FERD3L
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 14
Consensus: GYrmCAtaTGkyAC
Weblogo: 
PSSM: P0      A      C      G      T
01    358      0  11947      0      G
02     33   8420      0   3527      Y
03   6695    357   4924      0      r
04   4083   6826    956     82      m
05      0  11947      0      0      C
06  11947      3     23      0      A
07      0   2615   3753  11947      t
08  11947   4568   2467      0      a
09      0      0      0  11947      T
10      0      0  11947      0      G
11    102   1497   3785   6563      k
12      0   3821   1372   6767      y
13  11947      0   3944     59      A
14      0  11947      0      0      C
Binding TFs: FERD3L (Helix-loop-helix DNA-binding domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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