DNA Binding Motif

						

			
Accessions: 5no6_BI (3D-footprint 20231221)

			
Names: Homeobox protein Hox-B13
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: TEAD4-HOXB13 complex bound to DNA
Length: 12
Consensus: GAATGynATAAm
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0     94      2      G
02     96      0      0      0      A
03     96      0      0      0      A
04      5     14      5     72      T
05      5      5     80      6      G
06      4     32      2     58      y
07     24     24     24     24      n
08     93      0      1      2      A
09      0      2      0     94      T
10     88      2      2      4      A
11     74      2      7     13      A
12     34     58      2      2      m
Type: Heterodimer
Binding TFs: 5no6_B (Homeobox domain)
5no6_I (TEA/ATTS domain family)
Binding Sites: 5no6_D
5no6_E
			
	
			


			

				

				
				
				
				

			

			

		

	
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