DNA Binding Motif

						

			
Accessions: ETV5_EVX1_2_3 (HumanTF2 1.0)

			
Names: ETV5_EVX1
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 19
Consensus: rsmGGWAATgrgyvaTtAk
Weblogo: 
PSSM: P0      A      C      G      T
01    146     65    119     51      r
02     34     97    169     27      s
03    117    265     24      3      m
04      0      0    265      0      G
05      4      0    265      7      G
06    191      0      0     74      W
07    265      0     42     25      A
08    265      4     40      7      A
09     14     52     20    265      T
10     62     40     99     64      g
11     67     18    163     18      r
12     48     59     96     62      g
13     28     87     61     89      y
14     78     82     76     30      v
15    265     38     56     99      a
16     17      0      2    265      T
17     47     62     26    265      t
18    265     15     33     75      A
19     64     35     94     72      k
Type: Heterodimer
Binding TFs: ETV5_TF1 (Ets-domain)
EVX1_TF1 / EVX1_TF2 (Homeobox domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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