DNA Binding Motif

						

			
Accessions: MA2116.1 (JASPAR 2024)

			
Names: Pou4
Organisms: Ciona intestinalis
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: SELEX
Length: 6
Consensus: ATAAAT
Weblogo: 
PSSM: P0      A      C      G      T
01    879     38     31     53      A
02     31     16      9    944      T
03    685     53     93    168      A
04    881     54     20     45      A
05    844     20     23    114      A
06     45     26     16    913      T
Type: Heterodimer
Binding TFs: Q4H2X8 (Homeobox domain, Pou domain - N-terminal to homeobox domain)
Q4H2X8
			
Publications: Candiani S, Pennati R, Oliveri D, Locascio A, Branno M, Castagnola P, Pestarino M, De Bernardi F. Ci-POU-IV expression identifies PNS neurons in embryos and larvae of the ascidian Ciona intestinalis. Dev Genes Evol 215:41-5 (2005). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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