DNA Binding Motif

						

			
Accessions: ETV2_TBX21_1 (HumanTF2 1.0)

			
Names: ETV2_TBX21
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 28
Consensus: gGTGTkAaarmkrkkTvwCRCmGGAwrk
Weblogo: 
PSSM: P0      A      C      G      T
01    620    401   1817    178      g
02     10     77   2438     74      G
03      3    694     12   2438      T
04      8      0   2438      1      G
05    289    512    140   2438      T
06    189    457   1564    874      k
07   1904    145    533    177      A
08   1135    243    474    585      a
09    924    428    560    526      a
10    787    202    889    560      r
11    798    869    559    212      m
12    241    560   1021    615      k
13    747     81   1388    221      r
14    337    375   1039    686      k
15    513    415    688    821      k
16    118    299    209   1811      T
17    620   1042    727     48      v
18   1227     60    458    694      w
19     14   2438      0     23      C
20   1669      3    764      2      R
21    150   2438    223     21      C
22   1205   1233     53      0      m
23      0      0   2438      9      G
24      0      0   2438      0      G
25   2438      0     33      4      A
26   2438    554     14   1296      w
27    771    200   1667     37      r
28    186    275    691   1286      k
Type: Heterodimer
Binding TFs: TBX21_TF2 (T-box)
ETV2_TF1 (Ets-domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.