DNA Binding Motif

						

			
Accessions: ZNF345_2 (HT-SELEX2 May2017), UN0184.1 (JASPAR 2024)

			
Names: ZNF345
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1, JASPAR 2024 2
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 22
Consensus: TTGCAACmyrrrCAACyGkaCc
Weblogo: 
PSSM: P0      A      C      G      T
01    117    508    145   3017      T
02    627    394     36   2988      T
03     95      1   3346      0      G
04    184   3327     35      0      C
05   3314      3    104     23      A
06   3367      3     20      0      A
07      0   3370      1      0      C
08   1682    876    579    232      m
09    247   1236    457   1430      y
10    925    551   1508    385      r
11   1005    687   1085    592      r
12   1595    166   1322    286      r
13     33   3322    134    166      C
14   3115    198     83    302      A
15   3348     18     29     13      A
16      0   3370      1      0      C
17    171   2118    513   1005      y
18      6     24   3370     21      G
19    204    315   1058   2009      k
20   2965    372    619    415      a
21    154   3169     37    514      C
22    640   1258    665    807      c
Type: Heterodimer
Binding TFs: ZNF345 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
Q14585 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
Q14585
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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