DNA Binding Motif

						

			
Accessions: ZSCAN31_methyl_1 (HT-SELEX2 May2017)

			
Names: ZSCAN31
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 19
Consensus: GCATAAyTGCCCyGCdkCc
Weblogo: 
PSSM: P0      A      C      G      T
01   2544    266  15409   2358      G
02     79  15984    249   3529      C
03  15896   3590    107      1      A
04      6      0      5  16812      T
05  15680      4      5   3911      A
06  16808      4     70      2      A
07    280  13595     16  12681      y
08    103   2353    457  14359      T
09     27     42  16803      6      G
10     86  16781      4    275      C
11    651  16718     11    246      C
12     27  16804      6     16      C
13     26  10059      0   6750      y
14     77      8  16803     11      G
15    107  16744      7    190      C
16   5354    778   5788   9237      d
17   3585   3278   9002   5852      k
18   1990  15194    858   1999      C
19   3178   9844   1697   2099      c
Binding TFs: ZSCAN31 (Zinc finger, C2H2 type, SCAN domain, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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