DNA Binding Motif

						

			
Accessions: UN0478.2 (JASPAR 2024)

			
Names: ZF-C2H2-15
Organisms: Ciona intestinalis
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: SELEX
Length: 8
Consensus: rAGAGAGm
Weblogo: 
PSSM: P0      A      C      G      T
01    591     76    251     81      r
02    911     20     45     23      A
03     99     14    872     14      G
04    900     58     25     17      A
05     48     24    917     10      G
06    815    146     11     27      A
07     41     17    922     20      G
08    272    547     88     93      m
Type: Heterodimer
Binding TFs: Q4H2K3 (Zinc finger, C2H2 type, C2H2 type zinc-finger (2 copies), Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
Q4H2K3
			
	
			


			

				

				
				
				
				

			

			

		

	
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