DNA Binding Motif

						

			
Accessions: CG4854_SOLEXA_5_FBgn0038766 (FlyZincFinger 1.0 )

			
Names: CG4854
Organisms: Drosophila melanogaster
Libraries: FlyZincFinger 1.0  1
1 Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]
Length: 25
Consensus: ayskrkkbvrkgtrGTTGGCAACrc
Weblogo: 
PSSM: P0      A      C      G      T
01    115     52     51     60      a
02     44     96     62    114      y
03     34     99    168     91      s
04     46     72    165    109      k
05    143     53    154     42      r
06     57     85    135    115      k
07     43     64    131    154      k
08     55    109    128    100      b
09    114    107     98     73      v
10    133     63    118     78      r
11     58     33    188    113      k
12     31     78    196     87      g
13     21     75     42    254      t
14    132     19    188     53      r
15     37      3    339     13      G
16     16      1      4    371      T
17     31      2      9    350      T
18     29      0    361      2      G
19     14      5    369      4      G
20     21    340      0     31      C
21    379      7      1      5      A
22    378      5      7      2      A
23      2    320      1     69      C
24    148     24    132     88      r
25     52    186     36     59      c
Binding TFs: CG4854 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
			
Publications: Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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