DNA Binding Motif

						

			
Accessions: 6o19_A (3D-footprint 20231221)

			
Names: Transcription factor Pho7
Organisms: Schizosaccharomyces pombe, Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal Structure of Pho7 complex with pho1 promoter site 2
Length: 12
Consensus: TCGGnnnnTAAA
Weblogo: 
PSSM: P0      A      C      G      T
01     12     12      6     66      T
02      0     96      0      0      C
03      0      0     96      0      G
04      0      0     96      0      G
05     24     24     24     24      n
06     24     24     24     24      n
07     24     24     24     24      n
08     24     24     24     24      n
09      6     12     12     66      T
10     70     12      8      6      A
11     96      0      0      0      A
12     83      0      6      7      A
Binding TFs: 6o19_A (Fungal Zn(2)-Cys(6) binuclear cluster domain)
Binding Sites: 6o19_B
6o19_C
			
Publications: Garg A, Goldgur Y, Sanchez AM, Schwer B, Shuman S. Structure of Fission Yeast Transcription Factor Pho7 Bound to pho1 Promoter DNA and Effect of Pho7 Mutations on DNA Binding and Phosphate Homeostasis. Mol Cell Biol : (2019). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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