DNA Binding Motif

						

			
Accessions: DMRTA1_methyl_1 (HT-SELEX2 May2017)

			
Names: DMRTA1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 12
Consensus: aattGwTACAtt
Weblogo: 
PSSM: P0      A      C      G      T
01   3173    740    962   1438      a
02   3213    512   1080   1398      a
03   1544   1109    710   4612      t
04    596   1185    933   4612      t
05      2      0   4612      6      G
06   1996   1306      0   2616      w
07   1097    204      3   4612      T
08   4612      0     52     37      A
09      3   4612      0      7      C
10   4612     10    224    492      A
11   2006    454   1048   4612      t
12    892    993    825   4612      t
Binding TFs: DMRTA1 (DM DNA binding domain, DMRTA motif)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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